BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E12LP1|AL425720
(762 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig273 1486 0.0
>3x_Contig273
Length = 1810
Score = 1486 bits (746), Expect = 0.0
Identities = 755/762 (99%)
Strand = Plus / Plus
Query: 1 atctctattttgtgaattgttttatttatttcatttcaatgacatcgcacttacaccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 atctctattttgtgaattgttttatttatttcatttcaatgacatcgcacttacaccaaa 272
Query: 61 atttacactttctctatactttatatatgaaaaaaaattgtcctttggttcttttgaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 atttacactttctctatactttatatatgaaaaaaaattgtcctttggttcttttgaatc 332
Query: 121 gaactcaaagcttatttacctcttcatgttgttcttccaatgttcttgtttttcatacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gaactcaaagcttatttacctcttcatgttgttcttccaatgttcttgtttttcatacct 392
Query: 181 atcttatttcaacgataccgaatatatatgtcttccggaatatatactgtggtgtttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 atcttatttcaacgataccgaatatatatgtcttccggaatatatactgtggtgtttgaa 452
Query: 241 gtaaatgacttggcagagtgagcgcagtctttgtgtgtgagcggatatattgaaagttta 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 453 gtaaatgacttggcagagtgagcgcagtctttgtgtgttagcggatatattgaaagttta 512
Query: 301 ttactctcatgcattggttactcatatataatgagattcaaaaatatgctgcttttatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttactctcatgcattggttactcatatataatgagattcaaaaatatgctgcttttatac 572
Query: 361 tctcatacttctcctcttgaagaaatcaaagactcttttggcagtgcttggttcacgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tctcatacttctcctcttgaagaaatcaaagactcttttggcagtgcttggttcacgttg 632
Query: 421 ttctttatgttctttacttgcggtaccatcagaactggttatatctttggcagaagaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ttctttatgttctttacttgcggtaccatcagaactggttatatctttggcagaagaaac 692
Query: 481 cattacagaagaacgattcatacgtttggcagatgcgtctataacttgagaactctttgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 cattacagaagaacgattcatacgtttggcagatgcgtctataacttgagaactctttgg 752
Query: 541 aggtaacatcgaatgtctgtdatttgttctgtttgatggattcgatgatactctcggttt 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 753 aggtaacatcgaatgtctgtaatttgttctgtttgatggattcgatgatactctcggttt 812
Query: 601 tgatgtttcgaattgatttatcgaccccgatacgtttctagacggtataccattcgattt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 tgatgtttcgaattgatttatcgaccccgatacgtttctagacggtataccattcgattt 872
Query: 661 aacagaagaaattctttcatttkttttctgtkaatttkcakatactcttcttccgccaga 720
|||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||||
Sbjct: 873 aacagaagaaattctttcatttgttttctgtgaatttgcagatactcttcttccgccaga 932
Query: 721 agagtckgagctgacactcgtctttgaattattatagtatga 762
|||||| |||||||||||||||||||||||||||||||||||
Sbjct: 933 agagtcggagctgacactcgtctttgaattattatagtatga 974
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7385
Number of Sequences: 1807
Number of extensions: 7385
Number of successful extensions: 165
Number of sequences better than 1.0e-20: 1
length of query: 762
length of database: 10,358,551
effective HSP length: 16
effective length of query: 746
effective length of database: 10,329,639
effective search space: 7705910694
effective search space used: 7705910694
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)